Gm44796 Gene Detail

Summary

• Symbol
  Gm44796
• Name
  predicted gene 44796

• Feature Type
  lncRNA gene
• IDs
  MGI:5753372
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:23912559-23913810 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753372	lncRNA gene	Chr7:23912559-23913810 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0015632	unclassified non-coding RNA gene	Chr7:21974289-21975540 (+)
AKR/J	MGP_AKRJ_G0015595	unclassified non-coding RNA gene	Chr7:22502111-22503362 (+)
BALB/cJ	MGP_BALBcJ_G0015594	unclassified non-coding RNA gene	Chr7:22209042-22210293 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0016047	unclassified non-coding RNA gene	Chr7:23246561-23247812 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013780	unclassified non-coding RNA gene	Chr7:23479589-23480833 (+)
CAST/EiJ	MGP_CASTEiJ_G0014972	unclassified non-coding RNA gene	Chr7:16359163-16360409 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0015491	unclassified non-coding RNA gene	Chr7:21922073-21923324 (+)
FVB/NJ	MGP_FVBNJ_G0015498	unclassified non-coding RNA gene	Chr7:21876903-21878154 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0016089	unclassified non-coding RNA gene	Chr7:22204343-22205594 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0014543	unclassified non-coding RNA gene	Chr7:13538488-13539725 (+)
WSB/EiJ	MGP_WSBEiJ_G0015076	unclassified non-coding RNA gene	Chr7:22328135-22329386 (+)

Homology

• Gene Tree
  Gm44796
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000108361 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108361	Ensembl Gene Model | MGI Sequence Detail	1252	C57BL/6J
transcript	ENSMUST00000205272	Ensembl | MGI Sequence Detail	626	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;