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Gm43959 Pseudogene Detail
Summary
  • Symbol
    Gm43959
  • Name
    predicted gene, 43959
  • Feature Type
    pseudogene
  • IDs
    MGI:5690351
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:85088675-85089251 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5690351
 pseudogene Chr6:85088675-85089251 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013584
 pseudogene Chr6:86228978-86229555 (+)
A/J MGP_AJ_G0013564
 pseudogene Chr6:82933519-82934096 (+)
AKR/J MGP_AKRJ_G0013526
 pseudogene Chr6:85340773-85341350 (+)
BALB/cJ MGP_BALBcJ_G0013544
 pseudogene Chr6:82952600-82953176 (+)
C3H/HeJ MGP_C3HHeJ_G0013392
 pseudogene Chr6:99093224-99093800 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013932
 pseudogene Chr6:88602792-88603368 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011970
 pseudogene Chr6:81258219-81258796 (+)
CAST/EiJ MGP_CASTEiJ_G0013086
 pseudogene Chr6:85374455-85375031 (+)
CBA/J MGP_CBAJ_G0013364
 pseudogene Chr6:92096407-92096983 (+)
DBA/2J MGP_DBA2J_G0013444
 pseudogene Chr6:82238497-82239073 (+)
FVB/NJ MGP_FVBNJ_G0013444
 pseudogene Chr6:81441744-81442321 (+)
LP/J MGP_LPJ_G0013519
 pseudogene Chr6:86215282-86215859 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013456
 pseudogene Chr6:96301822-96302399 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013923
 pseudogene Chr6:85160400-85160977 (+)
PWK/PhJ MGP_PWKPhJ_G0012892
 pseudogene Chr6:81174416-81174992 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012672
 pseudogene Chr6:84009553-84010129 (+)
WSB/EiJ MGP_WSBEiJ_G0013135
 pseudogene Chr6:85594944-85595520 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107769 Ensembl Gene Model | MGI Sequence Detail 577 C57BL/6J ±  kb
transcript ENSMUST00000203740 Ensembl | MGI Sequence Detail 577 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
    Phenotypes 1
  • Earliest
    J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory