Gm43922 Pseudogene Detail

Summary

• Symbol
  Gm43922
• Name
  predicted gene, 43922

• Feature Type
  pseudogene
• IDs
  MGI:5690314
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:121515155-121515482 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690314	pseudogene	Chr6:121515155-121515482 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013676	pseudogene	Chr6:124491013-124491337 (+)
A/J	MGP_AJ_G0013661	pseudogene	Chr6:119700775-119701099 (+)
AKR/J	MGP_AKRJ_G0013624	pseudogene	Chr6:122924094-122924418 (+)
BALB/cJ	MGP_BALBcJ_G0013642	pseudogene	Chr6:119460820-119461144 (+)
C3H/HeJ	MGP_C3HHeJ_G0013487	pseudogene	Chr6:122952590-122952914 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014030	pseudogene	Chr6:127681271-127681598 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012031	pseudogene	Chr6:116598506-116598831 (+)
CAST/EiJ	MGP_CASTEiJ_G0013173	pseudogene	Chr6:123416080-123416407 (+)
CBA/J	MGP_CBAJ_G0013458	pseudogene	Chr6:132738272-132738596 (+)
DBA/2J	MGP_DBA2J_G0013538	pseudogene	Chr6:118587824-118588148 (+)
FVB/NJ	MGP_FVBNJ_G0013538	pseudogene	Chr6:117731752-117732076 (+)
LP/J	MGP_LPJ_G0013617	pseudogene	Chr6:124475699-124476023 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013552	pseudogene	Chr6:136674257-136674581 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014023	pseudogene	Chr6:122963467-122963791 (+)
PWK/PhJ	MGP_PWKPhJ_G0012982	pseudogene	Chr6:117631031-117631358 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012767	pseudogene	Chr6:121702389-121702716 (+)
WSB/EiJ	MGP_WSBEiJ_G0013229	pseudogene	Chr6:123263566-123263890 (+)

Homology

• Gene Tree
  Gm43922
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107923 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107923	Ensembl Gene Model | MGI Sequence Detail	328	C57BL/6J
transcript	ENSMUST00000205071	Ensembl | MGI Sequence Detail	328	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;