Gm43916 Gene Detail

Summary

• Symbol
  Gm43916
• Name
  predicted gene, 43916

• Feature Type
  lncRNA gene
• IDs
  MGI:5690308
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:120928862-120929828 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  16 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690308	lncRNA gene	Chr6:120928862-120929828 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004348	antisense lncRNA gene	Chr6:123874375-123875340 (+)
A/J	MGP_AJ_G0004325	antisense lncRNA gene	Chr6:119109445-119110410 (+)
AKR/J	MGP_AKRJ_G0004308	antisense lncRNA gene	Chr6:122332844-122333809 (+)
BALB/cJ	MGP_BALBcJ_G0004311	antisense lncRNA gene	Chr6:118870408-118871373 (+)
C3H/HeJ	MGP_C3HHeJ_G0004260	antisense lncRNA gene	Chr6:122348832-122349797 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004461	antisense lncRNA gene	Chr6:127051144-127052110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003928	antisense lncRNA gene	Chr6:116007306-116008260 (+)
CAST/EiJ	MGP_CASTEiJ_G0004222	antisense lncRNA gene	Chr6:122782927-122783889 (+)
CBA/J	MGP_CBAJ_G0004254	antisense lncRNA gene	Chr6:132091683-132092648 (+)
DBA/2J	MGP_DBA2J_G0004269	antisense lncRNA gene	Chr6:117999582-118000548 (+)
FVB/NJ	MGP_FVBNJ_G0004286	antisense lncRNA gene	Chr6:117135256-117136222 (+)
LP/J	MGP_LPJ_G0004349	antisense lncRNA gene	Chr6:123871428-123872393 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004277	antisense lncRNA gene	Chr6:136057983-136058948 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004458	antisense lncRNA gene	Chr6:122348600-122349566 (+)
PWK/PhJ	MGP_PWKPhJ_G0004175	antisense lncRNA gene	Chr6:117040061-117041024 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004118	antisense lncRNA gene	Chr6:121095228-121096195 (+)
WSB/EiJ	MGP_WSBEiJ_G0004259	antisense lncRNA gene	Chr6:122644292-122645254 (+)

Homology

• Gene Tree
  Gm43916
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108232 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108232	Ensembl Gene Model | MGI Sequence Detail	967	C57BL/6J
transcript	ENSMUST00000205062	Ensembl | MGI Sequence Detail	967	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;