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Gm43647 Gene Detail
Summary
  • Symbol
    Gm43647
  • Name
    predicted gene 43647
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663784
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
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  • Sequence Map
    Chr14:54130987-54199088 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, Syntenic
Strain
Comparison
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  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663784
lncRNA gene Chr14:54155784-54198972 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003243
antisense lncRNA gene Chr14:47854053-47880717 (-)
A/J MGP_AJ_G0003219
antisense lncRNA gene Chr14:46947304-46978760 (-)
AKR/J MGP_AKRJ_G0003202
antisense lncRNA gene Chr14:48646412-48673080 (-)
BALB/cJ MGP_BALBcJ_G0003208
antisense lncRNA gene Chr14:46914799-46942268 (-)
C3H/HeJ MGP_C3HHeJ_G0003161
antisense lncRNA gene Chr14:48324715-48351439 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003350
antisense lncRNA gene Chr14:50284714-50323198 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002875
antisense lncRNA gene Chr14:45375742-45401906 (-)
CAST/EiJ MGP_CASTEiJ_G0003127
antisense lncRNA gene Chr14:44568571-44595203 (-)
CBA/J MGP_CBAJ_G0003158
antisense lncRNA gene Chr14:51782877-51809541 (-)
DBA/2J MGP_DBA2J_G0003163
antisense lncRNA gene Chr14:46678351-46705831 (-)
FVB/NJ MGP_FVBNJ_G0003182
antisense lncRNA gene Chr14:46152789-46179451 (-)
LP/J MGP_LPJ_G0003240
antisense lncRNA gene Chr14:48870051-48900238 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003171
antisense lncRNA gene Chr14:51246325-51272988 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003352
antisense lncRNA gene Chr14:47831762-47858431 (-)
PWK/PhJ MGP_PWKPhJ_G0003085
antisense lncRNA gene Chr14:43219085-43245954 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003031
antisense lncRNA gene Chr14:43807907-43835247 (-)
WSB/EiJ MGP_WSBEiJ_G0003161
antisense lncRNA gene Chr14:48126825-48154798 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105963 Ensembl Gene Model | MGI Sequence Detail 68102 C57BL/6J ±  kb
transcript ENSMUST00000244883 Ensembl | MGI Sequence Detail 1627 Not Applicable  
For the selected sequence
References
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  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/27/2022
MGI 6.21
The Jackson Laboratory