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Gm43581 Gene Detail
Summary
  • Symbol
    Gm43581
  • Name
    predicted gene 43581
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663718
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:104642994-104645857 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663718
lncRNA gene Chr3:104642994-104645857 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036990
sense intronic lncRNA gene Chr3:105951978-105954835 (+)
A/J MGP_AJ_G0036979
sense intronic lncRNA gene Chr3:102585291-102588154 (+)
AKR/J MGP_AKRJ_G0036926
sense intronic lncRNA gene Chr3:105105963-105108825 (+)
BALB/cJ MGP_BALBcJ_G0036969
sense intronic lncRNA gene Chr3:102360559-102363411 (+)
C3H/HeJ MGP_C3HHeJ_G0036656
sense intronic lncRNA gene Chr3:105479127-105481979 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037482
sense intronic lncRNA gene Chr3:109919936-109922792 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034534
sense intronic lncRNA gene Chr3:98696594-98699638 (+)
CAST/EiJ MGP_CASTEiJ_G0035844
sense intronic lncRNA gene Chr3:104592745-104595606 (+)
CBA/J MGP_CBAJ_G0036631
sense intronic lncRNA gene Chr3:113653089-113655943 (+)
DBA/2J MGP_DBA2J_G0036806
sense intronic lncRNA gene Chr3:101837738-101840588 (+)
FVB/NJ MGP_FVBNJ_G0036756
sense intronic lncRNA gene Chr3:99759905-99762767 (+)
LP/J MGP_LPJ_G0036853
sense intronic lncRNA gene Chr3:107320636-107323496 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036764
sense intronic lncRNA gene Chr3:119783081-119785939 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037600
sense intronic lncRNA gene Chr3:104666834-104669689 (+)
PWK/PhJ MGP_PWKPhJ_G0035536
sense intronic lncRNA gene Chr3:101616419-101619359 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035345
sense intronic lncRNA gene Chr3:102715677-102718423 (+)
WSB/EiJ MGP_WSBEiJ_G0036044
sense intronic lncRNA gene Chr3:105229048-105231907 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105199 Ensembl Gene Model | MGI Sequence Detail 2864 C57BL/6J ±  kb
transcript ENSMUST00000196766 Ensembl | MGI Sequence Detail 2864 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory