Gm43037 Pseudogene Detail

Summary

• Symbol
  Gm43037
• Name
  predicted gene 43037

• Feature Type
  pseudogene
• IDs
  MGI:5663174
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:142542199-142542709 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663174	pseudogene	Chr5:142542199-142542709 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040415	pseudogene	Chr5:147797351-147797874 (+)
A/J	MGP_AJ_G0040393	pseudogene	Chr5:141472061-141472571 (+)
AKR/J	MGP_AKRJ_G0040324	pseudogene	Chr5:145883407-145883930 (+)
BALB/cJ	MGP_BALBcJ_G0040400	pseudogene	Chr5:142720290-142720800 (+)
C3H/HeJ	MGP_C3HHeJ_G0040022	pseudogene	Chr5:146705491-146706001 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041013	pseudogene	Chr5:153215179-153215689 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037369	pseudogene	Chr5:135290872-135291330 (+)
CAST/EiJ	MGP_CASTEiJ_G0039087	pseudogene	Chr5:146161040-146161552 (+)
CBA/J	MGP_CBAJ_G0039988	pseudogene	Chr5:159475072-159475587 (+)
DBA/2J	MGP_DBA2J_G0040194	pseudogene	Chr5:141246842-141247365 (+)
FVB/NJ	MGP_FVBNJ_G0040142	pseudogene	Chr5:140438842-140439352 (+)
LP/J	MGP_LPJ_G0040234	pseudogene	Chr5:148414714-148415237 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040135	pseudogene	Chr5:161977010-161977520 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041090	pseudogene	Chr5:145737157-145737667 (+)
PWK/PhJ	MGP_PWKPhJ_G0038771	pseudogene	Chr5:140315180-140315700 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038480	pseudogene	Chr5:143477398-143477909 (+)
WSB/EiJ	MGP_WSBEiJ_G0039329	pseudogene	Chr5:146534150-146534678 (+)

Homology

• Gene Tree
  Gm43037
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105213 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105213	Ensembl Gene Model | MGI Sequence Detail	511	C57BL/6J
transcript	ENSMUST00000196808	Ensembl | MGI Sequence Detail	250	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;