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Gm42990 Pseudogene Detail
Summary
  • Symbol
    Gm42990
  • Name
    predicted gene 42990
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:5663127
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:115896800-115897111 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663127
 pseudogenic gene segment Chr12:115896800-115897111 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000232
 pseudogenic gene segment Chr12:118727636-118727933 (-)
A/J MGP_AJ_G0000209
 pseudogenic gene segment Chr12:114375072-114375360 (-)
AKR/J MGP_AKRJ_G0000209
 pseudogenic gene segment Chr12:117826263-117826574 (-)
BALB/cJ MGP_BALBcJ_G0000207
 pseudogenic gene segment Chr12:114859677-114859988 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0000311
 pseudogenic gene segment Chr12:122527427-122527738 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0000248
 pseudogenic gene segment Chr12:118854355-118854666 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000214
 pseudogenic gene segment Chr12:130677936-130678247 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000294
 pseudogenic gene segment Chr12:116986816-116987127 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    11
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106434 Ensembl Gene Model | MGI Sequence Detail 312 C57BL/6J ±  kb
transcript ENSMUST00000199231 Ensembl | MGI Sequence Detail 312 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory