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Gm42920 Gene Detail
Summary
  • Symbol
    Gm42920
  • Name
    predicted gene 42920
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663057
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:38369398-38373636 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663057
lncRNA gene Chr3:38369398-38373636 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006167
lincRNA gene Chr3:36248778-36253040 (+)
A/J MGP_AJ_G0006159
lincRNA gene Chr3:35497674-35501918 (+)
AKR/J MGP_AKRJ_G0006135
lincRNA gene Chr3:36178813-36183560 (+)
BALB/cJ MGP_BALBcJ_G0006135
lincRNA gene Chr3:35262602-35266840 (+)
C3H/HeJ MGP_C3HHeJ_G0006085
lincRNA gene Chr3:36235100-36239344 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006297
lincRNA gene Chr3:37904942-37909180 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005608
lincRNA gene Chr3:33181881-33186205 (+)
CAST/EiJ MGP_CASTEiJ_G0006020
lincRNA gene Chr3:36135516-36139691 (+)
CBA/J MGP_CBAJ_G0006070
lincRNA gene Chr3:38937836-38942080 (+)
DBA/2J MGP_DBA2J_G0006089
lincRNA gene Chr3:34974357-34978594 (+)
FVB/NJ MGP_FVBNJ_G0006113
lincRNA gene Chr3:34388124-34392362 (+)
LP/J MGP_LPJ_G0006171
lincRNA gene Chr3:37061724-37066045 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006103
lincRNA gene Chr3:41420535-41424779 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006301
lincRNA gene Chr3:36035880-36040142 (+)
PWK/PhJ MGP_PWKPhJ_G0005965
lincRNA gene Chr3:34656239-34660482 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005874
lincRNA gene Chr3:35393345-35396919 (+)
WSB/EiJ MGP_WSBEiJ_G0006067
lincRNA gene Chr3:36048490-36052752 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106008 Ensembl Gene Model | MGI Sequence Detail 4239 C57BL/6J ±  kb
transcript ENSMUST00000196616 Ensembl | MGI Sequence Detail 409 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 5
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory