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Gm42869 Gene Detail
Summary
  • Symbol
    Gm42869
  • Name
    predicted gene 42869
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663006
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:100624902-100627022 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663006
lncRNA gene Chr3:100624902-100627022 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036959
sense intronic lncRNA gene Chr3:101743305-101745425 (-)
A/J MGP_AJ_G0036947
sense intronic lncRNA gene Chr3:98534312-98536432 (-)
AKR/J MGP_AKRJ_G0036894
sense intronic lncRNA gene Chr3:100927138-100929258 (-)
BALB/cJ MGP_BALBcJ_G0036938
sense intronic lncRNA gene Chr3:98301064-98303184 (-)
C3H/HeJ MGP_C3HHeJ_G0036624
sense intronic lncRNA gene Chr3:101245080-101247200 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037450
sense intronic lncRNA gene Chr3:105478419-105480539 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035813
sense intronic lncRNA gene Chr3:100350119-100352241 (-)
CBA/J MGP_CBAJ_G0036599
sense intronic lncRNA gene Chr3:109091059-109093179 (-)
DBA/2J MGP_DBA2J_G0036774
sense intronic lncRNA gene Chr3:97780607-97782727 (-)
FVB/NJ MGP_FVBNJ_G0036724
sense intronic lncRNA gene Chr3:95712394-95714514 (-)
LP/J MGP_LPJ_G0036822
sense intronic lncRNA gene Chr3:103105242-103107362 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036732
sense intronic lncRNA gene Chr3:115339277-115341397 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037568
sense intronic lncRNA gene Chr3:100429935-100432055 (-)
PWK/PhJ MGP_PWKPhJ_G0035506
sense intronic lncRNA gene Chr3:97534667-97536794 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035318
sense intronic lncRNA gene Chr3:98539628-98541757 (-)
WSB/EiJ MGP_WSBEiJ_G0036013
sense intronic lncRNA gene Chr3:100994739-100996859 (-)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105137 Ensembl Gene Model | MGI Sequence Detail 2121 C57BL/6J ±  kb
transcript ENSMUST00000199953 Ensembl | MGI Sequence Detail 2121 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/17/2019
MGI 6.14
The Jackson Laboratory