About   Help   FAQ
Gm42869 Gene Detail
Summary
  • Symbol
    Gm42869
  • Name
    predicted gene 42869
Location &
Maps
more
  • Sequence Map
    Chr3:100624902-100627022 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663006
lncRNA gene Chr3:100624902-100627022 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036959
sense intronic lncRNA gene Chr3:101743305-101745425 (-)
A/J MGP_AJ_G0036947
sense intronic lncRNA gene Chr3:98534312-98536432 (-)
AKR/J MGP_AKRJ_G0036894
sense intronic lncRNA gene Chr3:100927138-100929258 (-)
BALB/cJ MGP_BALBcJ_G0036938
sense intronic lncRNA gene Chr3:98301064-98303184 (-)
C3H/HeJ MGP_C3HHeJ_G0036624
sense intronic lncRNA gene Chr3:101245080-101247200 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037450
sense intronic lncRNA gene Chr3:105478419-105480539 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035813
sense intronic lncRNA gene Chr3:100350119-100352241 (-)
CBA/J MGP_CBAJ_G0036599
sense intronic lncRNA gene Chr3:109091059-109093179 (-)
DBA/2J MGP_DBA2J_G0036774
sense intronic lncRNA gene Chr3:97780607-97782727 (-)
FVB/NJ MGP_FVBNJ_G0036724
sense intronic lncRNA gene Chr3:95712394-95714514 (-)
LP/J MGP_LPJ_G0036822
sense intronic lncRNA gene Chr3:103105242-103107362 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036732
sense intronic lncRNA gene Chr3:115339277-115341397 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037568
sense intronic lncRNA gene Chr3:100429935-100432055 (-)
PWK/PhJ MGP_PWKPhJ_G0035506
sense intronic lncRNA gene Chr3:97534667-97536794 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035318
sense intronic lncRNA gene Chr3:98539628-98541757 (-)
WSB/EiJ MGP_WSBEiJ_G0036013
sense intronic lncRNA gene Chr3:100994739-100996859 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105137 Ensembl Gene Model | MGI Sequence Detail 2121 C57BL/6J ±  kb
transcript ENSMUST00000199953 Ensembl | MGI Sequence Detail 2121 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/13/2020
MGI 6.16
The Jackson Laboratory