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Gm42849 Gene Detail
Summary
  • Symbol
    Gm42849
  • Name
    predicted gene 42849
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662986
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:34104370-34106176 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662986
 lncRNA gene Chr5:34104370-34106176 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0006603
 lincRNA gene Chr5:31100165-31102614 (+)
AKR/J MGP_AKRJ_G0006573
 lincRNA gene Chr5:32295965-32301986 (+)
BALB/cJ MGP_BALBcJ_G0006578
 lincRNA gene Chr5:31626094-31630046 (+)
C3H/HeJ MGP_C3HHeJ_G0006525
 lincRNA gene Chr5:32334341-32337043 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006742
 lincRNA gene Chr5:34036106-34037835 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0006506
 lincRNA gene Chr5:34759244-34764855 (+)
DBA/2J MGP_DBA2J_G0006528
 lincRNA gene Chr5:31274742-31276870 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0006610
 lincRNA gene Chr5:32563985-32571640 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006534
 lincRNA gene Chr5:35635853-35637556 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0006500
 lincRNA gene Chr5:31888752-31890450 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    13
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107043 Ensembl Gene Model | MGI Sequence Detail 1807 C57BL/6J ±  kb
transcript ENSMUST00000202834 Ensembl | MGI Sequence Detail 1584 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory