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Gm42845 Pseudogene Detail
Summary
  • Symbol
    Gm42845
  • Name
    predicted gene 42845
  • Feature Type
    pseudogene
  • IDs
    MGI:5662982
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:87884965-87885069 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    49 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662982
 pseudogene Chr5:87884965-87885069 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0013150
 pseudogene Chr5:85074493-85074597 (-)
AKR/J MGP_AKRJ_G0013115
 pseudogene Chr5:87898309-87898413 (-)
BALB/cJ MGP_BALBcJ_G0013131
 pseudogene Chr5:85987331-85987435 (-)
C3H/HeJ MGP_C3HHeJ_G0012975
 pseudogene Chr5:88299455-88299559 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0011757
 pseudogene Chr5:130410301-130410388 (+)
CAST/EiJ MGP_CASTEiJ_G0012708
 pseudogene Chr5:87671806-87671900 (-)
CBA/J MGP_CBAJ_G0012947
 pseudogene Chr5:95238217-95238321 (-)
DBA/2J MGP_DBA2J_G0013027
 pseudogene Chr5:85250371-85250475 (-)
FVB/NJ MGP_FVBNJ_G0013030
 pseudogene Chr5:84160304-84160408 (-)
LP/J MGP_LPJ_G0013100
 pseudogene Chr5:89099322-89099426 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0013493
 pseudogene Chr5:87456624-87456728 (-)
PWK/PhJ MGP_PWKPhJ_G0012529
 pseudogene Chr5:84238400-84238494 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012416
 pseudogene Chr5:138004418-138004506 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Gm42845
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105796 Ensembl Gene Model | MGI Sequence Detail 105 C57BL/6J ±  kb
transcript ENSMUST00000197766 Ensembl | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory