Gm42841 Gene Detail

Summary

• Symbol
  Gm42841
• Name
  predicted gene 42841

• Feature Type
  unclassified gene
• IDs
  MGI:5662978
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:56036017-56037948 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662978	unclassified gene	Chr3:56036017-56037948 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0001145	unclassified gene	Chr3:53184542-53186424 (-)
AKR/J	MGP_AKRJ_G0001131	unclassified gene	Chr3:54270020-54271912 (-)
BALB/cJ	MGP_BALBcJ_G0001138	unclassified gene	Chr3:53035226-53037135 (-)
C3H/HeJ	MGP_C3HHeJ_G0001119	unclassified gene	Chr3:54477672-54480693 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001253	unclassified gene	Chr3:56932163-56935715 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000970	unclassified gene	Chr3:49674031-49676410 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0001110	unclassified gene	Chr3:58769734-58775243 (-)
DBA/2J	MGP_DBA2J_G0001114	unclassified gene	Chr3:52728659-52735914 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0001173	unclassified gene	Chr3:55588468-55591159 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0001244	unclassified gene	Chr3:54203589-54207203 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0001036	unclassified gene	Chr3:53936316-53938801 (-)
WSB/EiJ	MGP_WSBEiJ_G0001118	unclassified gene	Chr3:54329595-54332481 (-)

Homology

• Gene Tree
  Gm42841
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000106528 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106528	Ensembl Gene Model | MGI Sequence Detail	1932	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;