Gm42814 Pseudogene Detail

Summary

• Symbol
  Gm42814
• Name
  predicted gene 42814

• Feature Type
  pseudogene
• IDs
  MGI:5662951
  NCBI Gene: 115489721
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:88336243-88336702 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  5 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662951	pseudogene	Chr3:88336228-88336766 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0012223	pseudogene	Chr3:87705926-87708306 (+)
BALB/cJ	MGP_BALBcJ_G0012238	pseudogene	Chr3:85682949-85687572 (+)
C3H/HeJ	MGP_C3HHeJ_G0012107	pseudogene	Chr3:87968773-87970077 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012551	pseudogene	Chr3:91883640-91884099 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011883	pseudogene	Chr3:88199789-88201186 (+)
CBA/J	MGP_CBAJ_G0012083	pseudogene	Chr3:95028511-95028944 (+)
DBA/2J	MGP_DBA2J_G0012140	pseudogene	Chr3:85080877-85081729 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0012210	pseudogene	Chr3:89599780-89600311 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0011727	pseudogene	Chr3:84860654-84861175 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm42814
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm42814
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000106568 (Evidence)
• NCBI Gene
  115489721

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106568	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000199370	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426