Gm42801 Gene Detail

Summary

• Symbol
  Gm42801
• Name
  predicted gene 42801

• Feature Type
  unclassified gene
• IDs
  MGI:5662938
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:27441088-27443952 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662938	unclassified gene	Chr6:27441088-27443952 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001869	unclassified gene	Chr6:25118330-25122918 (-)
A/J	MGP_AJ_G0001846	unclassified gene	Chr6:24043543-24046407 (-)
AKR/J	MGP_AKRJ_G0001833	unclassified gene	Chr6:24867038-24869906 (-)
BALB/cJ	MGP_BALBcJ_G0001843	unclassified gene	Chr6:24209961-24219590 (-)
C3H/HeJ	MGP_C3HHeJ_G0001820	unclassified gene	Chr6:24855681-24858539 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0001622	unclassified gene	Chr6:22299922-22304515 (-)
CAST/EiJ	MGP_CASTEiJ_G0001789	unclassified gene	Chr6:24620452-24624190 (-)
CBA/J	MGP_CBAJ_G0001813	unclassified gene	Chr6:26806426-26809400 (-)
DBA/2J	MGP_DBA2J_G0001817	unclassified gene	Chr6:24012150-24014701 (-)
FVB/NJ	MGP_FVBNJ_G0001825	unclassified gene	Chr6:23779443-23782296 (-)
LP/J	MGP_LPJ_G0001872	unclassified gene	Chr6:25250864-25253714 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0001954	unclassified gene	Chr6:24741366-24745620 (-)
PWK/PhJ	MGP_PWKPhJ_G0001750	unclassified gene	Chr6:23539012-23542531 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001715	unclassified gene	Chr6:24419074-24421896 (-)
WSB/EiJ	MGP_WSBEiJ_G0001813	unclassified gene	Chr6:24699522-24702311 (-)

Homology

• Gene Tree
  Gm42801
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000107377 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107377	Ensembl Gene Model | MGI Sequence Detail	2865	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;