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Gm42775 Gene Detail
Summary
  • Symbol
    Gm42775
  • Name
    predicted gene 42775
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662912
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:110288952-110293937 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662912
lncRNA gene Chr9:110288952-110293937 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007510
lincRNA gene Chr9:112429764-112434712 (-)
A/J MGP_AJ_G0007505
lincRNA gene Chr9:108344230-108349214 (-)
AKR/J MGP_AKRJ_G0007477
lincRNA gene Chr9:111036279-111041262 (-)
BALB/cJ MGP_BALBcJ_G0007482
lincRNA gene Chr9:108086777-108091761 (-)
C3H/HeJ MGP_C3HHeJ_G0007427
lincRNA gene Chr9:111537638-111542625 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007654
lincRNA gene Chr9:115482555-115489003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006835
lincRNA gene Chr9:105574125-105579153 (-)
CAST/EiJ MGP_CASTEiJ_G0007330
lincRNA gene Chr9:111326617-111333663 (-)
CBA/J MGP_CBAJ_G0007408
lincRNA gene Chr9:119778692-119783657 (-)
DBA/2J MGP_DBA2J_G0007434
lincRNA gene Chr9:107806004-107810976 (-)
FVB/NJ MGP_FVBNJ_G0007450
lincRNA gene Chr9:106630162-106635026 (-)
LP/J MGP_LPJ_G0007514
lincRNA gene Chr9:112724501-112729485 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007431
lincRNA gene Chr9:121139454-121144438 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007659
lincRNA gene Chr9:111358325-111363302 (-)
PWK/PhJ MGP_PWKPhJ_G0007271
lincRNA gene Chr9:108047190-108052318 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007175
lincRNA gene Chr9:111448728-111456399 (-)
WSB/EiJ MGP_WSBEiJ_G0007390
lincRNA gene Chr9:111241986-111246658 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105484 Ensembl Gene Model | MGI Sequence Detail 4986 C57BL/6J ±  kb
transcript ENSMUST00000198407 Ensembl | MGI Sequence Detail 740 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory