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Gm42743 Gene Detail
Summary
  • Symbol
    Gm42743
  • Name
    predicted gene 42743
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662880
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:96269721-96279001 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662880
lncRNA gene Chr3:96269721-96279001 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006245
lincRNA gene Chr3:97082497-97088574 (+)
A/J MGP_AJ_G0006238
lincRNA gene Chr3:94035257-94041334 (+)
AKR/J MGP_AKRJ_G0006213
lincRNA gene Chr3:96242285-96248640 (+)
BALB/cJ MGP_BALBcJ_G0006213
lincRNA gene Chr3:93823919-93830014 (+)
C3H/HeJ MGP_C3HHeJ_G0006163
lincRNA gene Chr3:96523708-96529780 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006377
lincRNA gene Chr3:100643401-100649678 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005680
lincRNA gene Chr3:90355284-90363088 (+)
CAST/EiJ MGP_CASTEiJ_G0006097
lincRNA gene Chr3:95838062-95844134 (+)
CBA/J MGP_CBAJ_G0006148
lincRNA gene Chr3:104328257-104334343 (+)
DBA/2J MGP_DBA2J_G0006168
lincRNA gene Chr3:93336583-93344181 (+)
FVB/NJ MGP_FVBNJ_G0006190
lincRNA gene Chr3:91396663-91402735 (+)
LP/J MGP_LPJ_G0006249
lincRNA gene Chr3:98407268-98413395 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006181
lincRNA gene Chr3:110419004-110425036 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006382
lincRNA gene Chr3:95872893-95878990 (+)
PWK/PhJ MGP_PWKPhJ_G0006041
lincRNA gene Chr3:93235372-93241641 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005949
lincRNA gene Chr3:94173937-94182836 (+)
WSB/EiJ MGP_WSBEiJ_G0006144
lincRNA gene Chr3:96268265-96274342 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050936 Ensembl Gene Model | MGI Sequence Detail 9281 C57BL/6J ±  kb
transcript ENSMUST00000051089 Ensembl | MGI Sequence Detail 1511 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory