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Gm42720 Pseudogene Detail
Summary
  • Symbol
    Gm42720
  • Name
    predicted gene 42720
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:5662857
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:70493364-70493663 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662857
pseudogenic gene segment Chr6:70493364-70493663 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000288
pseudogenic gene segment Chr6:70895300-70895599 (-)
A/J MGP_AJ_G0000261
pseudogenic gene segment Chr6:68147939-68148238 (-)
AKR/J MGP_AKRJ_G0000260
pseudogenic gene segment Chr6:70108945-70109245 (-)
BALB/cJ MGP_BALBcJ_G0000256
pseudogenic gene segment Chr6:68215270-68215569 (-)
C3H/HeJ MGP_C3HHeJ_G0000210
pseudogenic gene segment Chr6:114134830-114135129 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000378
pseudogenic gene segment Chr6:72711266-72711565 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000248
pseudogenic gene segment Chr6:70057603-70057903 (-)
CBA/J MGP_CBAJ_G0000247
pseudogenic gene segment Chr6:75568316-75568615 (-)
DBA/2J MGP_DBA2J_G0000245
pseudogenic gene segment Chr6:67557643-67557942 (-)
FVB/NJ MGP_FVBNJ_G0000250
pseudogenic gene segment Chr6:66932207-66932506 (-)
LP/J MGP_LPJ_G0000299
pseudogenic gene segment Chr6:70755562-70755861 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000258
pseudogenic gene segment Chr6:79203498-79203798 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000355
pseudogenic gene segment Chr6:69957139-69957438 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000250
pseudogenic gene segment Chr6:70285408-70285707 (-)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106315 Ensembl Gene Model | MGI Sequence Detail 300 C57BL/6J ±  kb
transcript ENSMUST00000196813 Ensembl | MGI Sequence Detail 300 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory