Gm42639 Gene Detail

Summary

• Symbol
  Gm42639
• Name
  predicted gene 42639

• Feature Type
  unclassified gene
• IDs
  MGI:5662776
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:58102384-58104254 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662776	unclassified gene	Chr5:58102384-58104254 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001549	unclassified gene	Chr5:57252059-57253929 (+)
A/J	MGP_AJ_G0001530	unclassified gene	Chr5:55131288-55133150 (+)
AKR/J	MGP_AKRJ_G0001516	unclassified gene	Chr5:56925217-56927078 (+)
BALB/cJ	MGP_BALBcJ_G0001526	unclassified gene	Chr5:55738440-55740301 (+)
C3H/HeJ	MGP_C3HHeJ_G0001503	unclassified gene	Chr5:57220226-57222088 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001644	unclassified gene	Chr5:59560487-59562353 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001333	unclassified gene	Chr5:51930943-51932801 (+)
CAST/EiJ	MGP_CASTEiJ_G0001478	unclassified gene	Chr5:56222765-56224632 (+)
CBA/J	MGP_CBAJ_G0001494	unclassified gene	Chr5:61536690-61538556 (+)
DBA/2J	MGP_DBA2J_G0001499	unclassified gene	Chr5:55196981-55198849 (+)
FVB/NJ	MGP_FVBNJ_G0001506	unclassified gene	Chr5:54461756-54463536 (+)
LP/J	MGP_LPJ_G0001554	unclassified gene	Chr5:57635116-57637536 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001492	unclassified gene	Chr5:63278265-63291218 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001632	unclassified gene	Chr5:56538187-56540054 (+)
PWK/PhJ	MGP_PWKPhJ_G0001435	unclassified gene	Chr5:54235519-54237434 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001404	unclassified gene	Chr5:55983701-55985555 (+)
WSB/EiJ	MGP_WSBEiJ_G0001495	unclassified gene	Chr5:56687682-56689556 (+)

Homology

• Gene Tree
  Gm42639
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104871 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104871	Ensembl Gene Model | MGI Sequence Detail	1871	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;