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Gm42628 Pseudogene Detail
Summary
  • Symbol
    Gm42628
  • Name
    predicted gene 42628
  • Feature Type
    pseudogene
  • IDs
    MGI:5662765
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:129078918-129079681 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662765
pseudogene Chr3:129078918-129079681 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012407
pseudogene Chr3:131929212-131929975 (+)
A/J MGP_AJ_G0012402
pseudogene Chr3:127350681-127351444 (+)
AKR/J MGP_AKRJ_G0012366
pseudogene Chr3:130643014-130643777 (+)
BALB/cJ MGP_BALBcJ_G0012385
pseudogene Chr3:127191833-127192596 (+)
C3H/HeJ MGP_C3HHeJ_G0012247
pseudogene Chr3:131038955-131039718 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012699
pseudogene Chr3:136653613-136654376 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011063
pseudogene Chr3:122883655-122884418 (+)
CAST/EiJ MGP_CASTEiJ_G0012016
pseudogene Chr3:130680580-130681335 (+)
CBA/J MGP_CBAJ_G0012225
pseudogene Chr3:141248464-141249227 (+)
DBA/2J MGP_DBA2J_G0012283
pseudogene Chr3:126544788-126545551 (+)
FVB/NJ MGP_FVBNJ_G0012285
pseudogene Chr3:124122055-124122818 (+)
LP/J MGP_LPJ_G0012353
pseudogene Chr3:133441291-133442054 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012289
pseudogene Chr3:149217579-149218342 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012702
pseudogene Chr3:130307671-130308434 (+)
PWK/PhJ MGP_PWKPhJ_G0011855
pseudogene Chr3:126272918-126274096 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011673
pseudogene Chr3:128370198-128370961 (+)
WSB/EiJ MGP_WSBEiJ_G0012043
pseudogene Chr3:131016532-131017295 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm42628
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106417 Ensembl Gene Model | MGI Sequence Detail 764 C57BL/6J ±  kb
transcript ENSMUST00000198498 Ensembl | MGI Sequence Detail 764 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Diseases 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory