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Gm42531 Gene Detail
Summary
  • Symbol
    Gm42531
  • Name
    predicted gene 42531
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662668
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:150562311-150566358 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662668
lncRNA gene Chr5:150562311-150566358 (+)
129S1/SvImJ MGP_129S1SvImJ_G0037054
sense intronic lncRNA gene Chr5:156504840-156508885 (+)
A/J MGP_AJ_G0037042
sense intronic lncRNA gene Chr5:149796469-149800516 (+)
AKR/J MGP_AKRJ_G0036990
sense intronic lncRNA gene Chr5:154421252-154425301 (+)
BALB/cJ MGP_BALBcJ_G0037033
sense intronic lncRNA gene Chr5:151058408-151062455 (+)
C3H/HeJ MGP_C3HHeJ_G0036720
sense intronic lncRNA gene Chr5:155424532-155428579 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037545
sense intronic lncRNA gene Chr5:162216273-162220318 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034592
sense intronic lncRNA gene Chr5:144123647-144127922 (+)
CAST/EiJ MGP_CASTEiJ_G0035908
sense intronic lncRNA gene Chr5:155074725-155079056 (+)
CBA/J MGP_CBAJ_G0036695
sense intronic lncRNA gene Chr5:169054831-169058878 (+)
DBA/2J MGP_DBA2J_G0036870
sense intronic lncRNA gene Chr5:149447546-149451593 (+)
FVB/NJ MGP_FVBNJ_G0036820
sense intronic lncRNA gene Chr5:148692086-148696390 (+)
LP/J MGP_LPJ_G0036917
sense intronic lncRNA gene Chr5:157165680-157169727 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036827
sense intronic lncRNA gene Chr5:171104631-171108680 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037663
sense intronic lncRNA gene Chr5:154379342-154383451 (+)
PWK/PhJ MGP_PWKPhJ_G0035600
sense intronic lncRNA gene Chr5:148614160-148618389 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035409
sense intronic lncRNA gene Chr5:151664741-151668805 (+)
WSB/EiJ MGP_WSBEiJ_G0036108
sense intronic lncRNA gene Chr5:155191359-155195406 (+)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107178 Ensembl Gene Model | MGI Sequence Detail 4048 C57BL/6J ±  kb
transcript ENSMUST00000201648 Ensembl | MGI Sequence Detail 4048 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory