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Gm42525 Pseudogene Detail
Summary
  • Symbol
    Gm42525
  • Name
    predicted gene 42525
  • Feature Type
    pseudogene
  • IDs
    MGI:5662662
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:127480179-127481190 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662662
pseudogene Chr3:127480179-127481190 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039709
pseudogene Chr3:129965161-129966155 (-)
A/J MGP_AJ_G0039707
pseudogene Chr3:125520706-125521700 (-)
AKR/J MGP_AKRJ_G0039633
pseudogene Chr3:128761162-128763552 (-)
BALB/cJ MGP_BALBcJ_G0039677
pseudogene Chr3:125382574-125383568 (-)
C3H/HeJ MGP_C3HHeJ_G0039339
pseudogene Chr3:129144605-129145599 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040238
pseudogene Chr3:134652602-134655718 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036869
pseudogene Chr3:120773180-120773699 (-)
CAST/EiJ MGP_CASTEiJ_G0038459
pseudogene Chr3:128677443-128678437 (-)
CBA/J MGP_CBAJ_G0039310
pseudogene Chr3:139202315-139203309 (-)
DBA/2J MGP_DBA2J_G0039504
pseudogene Chr3:124740994-124741990 (-)
FVB/NJ MGP_FVBNJ_G0039462
pseudogene Chr3:122306131-122307080 (-)
LP/J MGP_LPJ_G0039543
pseudogene Chr3:131519350-131520344 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039464
pseudogene Chr3:147134196-147135191 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040339
pseudogene Chr3:128396300-128398499 (-)
PWK/PhJ MGP_PWKPhJ_G0038135
pseudogene Chr3:124458573-124459699 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037884
pseudogene Chr3:126485543-126486062 (-)
WSB/EiJ MGP_WSBEiJ_G0038693
pseudogene Chr3:129114270-129115724 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm42525
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105969 Ensembl Gene Model | MGI Sequence Detail 1012 C57BL/6J ±  kb
transcript ENSMUST00000196257 Ensembl | MGI Sequence Detail 527 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Diseases 1
    Phenotypes 3
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory