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Gm42493 Gene Detail
Summary
  • Symbol
    Gm42493
  • Name
    predicted gene 42493
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662630
  • Alliance
Location &
Maps
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  • Sequence Map
    Chr9:109277713-109289173 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
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  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662630
lncRNA gene Chr9:109277713-109289173 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004697
antisense lncRNA gene Chr9:111441819-111465233 (+)
A/J MGP_AJ_G0004677
antisense lncRNA gene Chr9:107130843-107404188 (+)
AKR/J MGP_AKRJ_G0004660
antisense lncRNA gene Chr9:110049921-110063496 (+)
BALB/cJ MGP_BALBcJ_G0004661
antisense lncRNA gene Chr9:106818883-107120738 (+)
C3H/HeJ MGP_C3HHeJ_G0004610
antisense lncRNA gene Chr9:110500707-110516915 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004811
antisense lncRNA gene Chr9:114483908-114497293 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004566
antisense lncRNA gene Chr9:110323810-110331698 (+)
CBA/J MGP_CBAJ_G0004604
antisense lncRNA gene Chr9:118593857-118618339 (+)
DBA/2J MGP_DBA2J_G0004619
antisense lncRNA gene Chr9:106838839-106851251 (+)
FVB/NJ MGP_FVBNJ_G0004637
antisense lncRNA gene Chr9:105677250-105691576 (+)
LP/J MGP_LPJ_G0004701
antisense lncRNA gene Chr9:111695931-111717022 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004624
antisense lncRNA gene Chr9:120131094-120143452 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004810
antisense lncRNA gene Chr9:110383586-110396810 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0004609
antisense lncRNA gene Chr9:110216744-110224450 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106134 Ensembl Gene Model | MGI Sequence Detail 11461 C57BL/6J ±  kb
For the selected sequence
References
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  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/10/2022
MGI 6.19
The Jackson Laboratory