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Gm42470 Gene Detail
Summary
  • Symbol
    Gm42470
  • Name
    predicted gene 42470
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662607
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:110655679-110656455 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662607
lncRNA gene Chr9:110655679-110656455 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007511
lincRNA gene Chr9:112821479-112822255 (+)
A/J MGP_AJ_G0007506
lincRNA gene Chr9:108716092-108716868 (+)
AKR/J MGP_AKRJ_G0007478
lincRNA gene Chr9:111415716-111416492 (+)
BALB/cJ MGP_BALBcJ_G0007483
lincRNA gene Chr9:108465135-108465911 (+)
C3H/HeJ MGP_C3HHeJ_G0007428
lincRNA gene Chr9:111923973-111924749 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007655
lincRNA gene Chr9:115885652-115886428 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006836
lincRNA gene Chr9:105936076-105936785 (+)
CAST/EiJ MGP_CASTEiJ_G0007331
lincRNA gene Chr9:111718497-111719273 (+)
CBA/J MGP_CBAJ_G0007409
lincRNA gene Chr9:120195319-120196095 (+)
DBA/2J MGP_DBA2J_G0007435
lincRNA gene Chr9:108177267-108178043 (+)
FVB/NJ MGP_FVBNJ_G0007451
lincRNA gene Chr9:107006449-107007221 (+)
LP/J MGP_LPJ_G0007515
lincRNA gene Chr9:113114280-113115056 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007432
lincRNA gene Chr9:121536864-121537640 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007660
lincRNA gene Chr9:111754931-111755703 (+)
PWK/PhJ MGP_PWKPhJ_G0007272
lincRNA gene Chr9:108423697-108424473 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007176
lincRNA gene Chr9:111834371-111837272 (+)
WSB/EiJ MGP_WSBEiJ_G0007391
lincRNA gene Chr9:111622117-111622893 (+)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105127 Ensembl Gene Model | MGI Sequence Detail 777 C57BL/6J ±  kb
transcript ENSMUST00000198086 Ensembl | MGI Sequence Detail 251 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory