Gm42436 Gene Detail

Summary

• Symbol
  Gm42436
• Name
  predicted gene 42436

• Feature Type
  unclassified gene
• IDs
  MGI:5662573
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:40956869-40960524 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662573	unclassified gene	Chr3:40956869-40960524 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001109	unclassified gene	Chr3:39001280-39004925 (+)
A/J	MGP_AJ_G0001089	unclassified gene	Chr3:38049743-38053402 (+)
AKR/J	MGP_AKRJ_G0001075	unclassified gene	Chr3:38770245-38773900 (+)
BALB/cJ	MGP_BALBcJ_G0001082	unclassified gene	Chr3:37821791-37825436 (+)
C3H/HeJ	MGP_C3HHeJ_G0001063	unclassified gene	Chr3:38893839-38897498 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001198	unclassified gene	Chr3:40621124-40624779 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000919	unclassified gene	Chr3:35550257-35554020 (+)
CAST/EiJ	MGP_CASTEiJ_G0001048	unclassified gene	Chr3:38761422-38765059 (+)
CBA/J	MGP_CBAJ_G0001054	unclassified gene	Chr3:41773828-41777487 (+)
DBA/2J	MGP_DBA2J_G0001058	unclassified gene	Chr3:37515758-37519403 (+)
FVB/NJ	MGP_FVBNJ_G0001069	unclassified gene	Chr3:36887706-36891359 (+)
LP/J	MGP_LPJ_G0001118	unclassified gene	Chr3:39741634-39745279 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001061	unclassified gene	Chr3:44233452-44237107 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001188	unclassified gene	Chr3:38638861-38642504 (+)
PWK/PhJ	MGP_PWKPhJ_G0001005	unclassified gene	Chr3:37188491-37192214 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000980	unclassified gene	Chr3:38033273-38036986 (+)
WSB/EiJ	MGP_WSBEiJ_G0001062	unclassified gene	Chr3:38645915-38649565 (+)

Homology

• Gene Tree
  Gm42436
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105517 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105517	Ensembl Gene Model | MGI Sequence Detail	3656	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;