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Gm42424 Pseudogene Detail
Summary
  • Symbol
    Gm42424
  • Name
    predicted gene 42424
  • Feature Type
    pseudogene
  • IDs
    MGI:5662561
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:139701647-139702022 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662561
pseudogene Chr5:139701647-139702022 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013295
pseudogene Chr5:144708148-144708523 (+)
A/J MGP_AJ_G0013274
pseudogene Chr5:138568198-138568573 (+)
AKR/J MGP_AKRJ_G0013239
pseudogene Chr5:142888051-142888426 (+)
BALB/cJ MGP_BALBcJ_G0013253
pseudogene Chr5:139810800-139811175 (+)
C3H/HeJ MGP_C3HHeJ_G0013103
pseudogene Chr5:143666182-143666557 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013622
pseudogene Chr5:150050425-150050800 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011766
pseudogene Chr5:132422128-132422512 (+)
CAST/EiJ MGP_CASTEiJ_G0012824
pseudogene Chr5:143079897-143080272 (+)
CBA/J MGP_CBAJ_G0013071
pseudogene Chr5:156256879-156257254 (+)
DBA/2J MGP_DBA2J_G0013154
pseudogene Chr5:138372149-138372524 (+)
FVB/NJ MGP_FVBNJ_G0013153
pseudogene Chr5:137499682-137500057 (+)
LP/J MGP_LPJ_G0013222
pseudogene Chr5:145329592-145329967 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013170
pseudogene Chr5:158871823-158872198 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013624
pseudogene Chr5:142726597-142726972 (+)
PWK/PhJ MGP_PWKPhJ_G0012637
pseudogene Chr5:137394104-137394483 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012427
pseudogene Chr5:140395556-140395936 (+)
WSB/EiJ MGP_WSBEiJ_G0012862
pseudogene Chr5:143481132-143481507 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104637 Ensembl Gene Model | MGI Sequence Detail 376 C57BL/6J ±  kb
transcript ENSMUST00000198319 Ensembl | MGI Sequence Detail 376 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2020
MGI 6.15
The Jackson Laboratory