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Gm42413 Gene Detail
Summary
  • Symbol
    Gm42413
  • Name
    predicted gene, 42413
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5648986
  • Alliance
Location &
Maps
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  • Sequence Map
    Chr5:45591731-45607480 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
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  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5648986
lncRNA gene Chr5:45591731-45607480 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004076
antisense lncRNA gene Chr5:44136043-44152933 (+)
A/J MGP_AJ_G0004057
antisense lncRNA gene Chr5:42602574-42618300 (+)
AKR/J MGP_AKRJ_G0004035
antisense lncRNA gene Chr5:44090716-44107271 (+)
BALB/cJ MGP_BALBcJ_G0004043
antisense lncRNA gene Chr5:43070855-43090973 (+)
C3H/HeJ MGP_C3HHeJ_G0003989
antisense lncRNA gene Chr5:44096753-44112551 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004192
antisense lncRNA gene Chr5:46226433-46242995 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003670
antisense lncRNA gene Chr5:39773311-39788642 (+)
CAST/EiJ MGP_CASTEiJ_G0003953
antisense lncRNA gene Chr5:43240196-43257293 (+)
CBA/J MGP_CBAJ_G0003983
antisense lncRNA gene Chr5:47486315-47505926 (+)
DBA/2J MGP_DBA2J_G0003998
antisense lncRNA gene Chr5:42690520-42706218 (+)
FVB/NJ MGP_FVBNJ_G0004017
antisense lncRNA gene Chr5:42118177-42133909 (+)
LP/J MGP_LPJ_G0004078
antisense lncRNA gene Chr5:44620067-44637334 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004006
antisense lncRNA gene Chr5:48224024-48240797 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004187
antisense lncRNA gene Chr5:43611111-43626791 (+)
PWK/PhJ MGP_PWKPhJ_G0003906
antisense lncRNA gene Chr5:41815802-41831642 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003851
antisense lncRNA gene Chr5:43051364-43066555 (+)
WSB/EiJ MGP_WSBEiJ_G0003988
antisense lncRNA gene Chr5:43670435-43686210 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Gm42413
  • Find Mice (IMSR)
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105255 Ensembl Gene Model | MGI Sequence Detail 15750 C57BL/6J ±  kb
For the selected sequence
References
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  • Summaries
    All 7
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/10/2022
MGI 6.19
The Jackson Laboratory