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Gm40292 Gene Detail
Summary
  • Symbol
    Gm40292
  • Name
    predicted gene, 40292
  • Synonyms
    Gm43454
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5623177
    NCBI Gene: 105244735
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:39464463-39470638 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5623177
 lncRNA gene Chr5:39464463-39470667 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006620
 lincRNA gene Chr5:37758402-37764539 (+)
A/J MGP_AJ_G0006614
 lincRNA gene Chr5:36498551-36504718 (+)
AKR/J MGP_AKRJ_G0006584
 lincRNA gene Chr5:37834168-37840323 (+)
BALB/cJ MGP_BALBcJ_G0006589
 lincRNA gene Chr5:36954877-36961044 (+)
C3H/HeJ MGP_C3HHeJ_G0006536
 lincRNA gene Chr5:37845226-37851365 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006754
 lincRNA gene Chr5:39721786-39727927 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006020
 lincRNA gene Chr5:34118886-34125286 (+)
CAST/EiJ MGP_CASTEiJ_G0006460
 lincRNA gene Chr5:37013339-37019402 (+)
CBA/J MGP_CBAJ_G0006517
 lincRNA gene Chr5:40647171-40653314 (+)
DBA/2J MGP_DBA2J_G0006539
 lincRNA gene Chr5:36598928-36605081 (+)
FVB/NJ MGP_FVBNJ_G0006560
 lincRNA gene Chr5:36082446-36088589 (+)
LP/J MGP_LPJ_G0006621
 lincRNA gene Chr5:38211068-38217211 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006546
 lincRNA gene Chr5:41393241-41399386 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006758
 lincRNA gene Chr5:37350932-37357077 (+)
PWK/PhJ MGP_PWKPhJ_G0006398
 lincRNA gene Chr5:35781072-35787269 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006308
 lincRNA gene Chr5:36805867-36811961 (+)
WSB/EiJ MGP_WSBEiJ_G0006511
 lincRNA gene Chr5:37439693-37445802 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107031 Ensembl Gene Model | MGI Sequence Detail 6176 C57BL/6J ±  kb
transcript ENSMUST00000202383 Ensembl | MGI Sequence Detail 553 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:5663591
References
more
  • Summaries
    All 9
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory