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Gm40153 Gene Detail
Summary
  • Symbol
    Gm40153
  • Name
    predicted gene, 40153
  • Synonyms
    Gm42563
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5623038
    NCBI Gene: 105244560
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:133351569-133369152 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5623038
 lncRNA gene Chr3:133351462-133369170 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006314
 lincRNA gene Chr3:136460799-136479287 (-)
A/J MGP_AJ_G0006307
 lincRNA gene Chr3:131635444-131656703 (-)
AKR/J MGP_AKRJ_G0006283
 lincRNA gene Chr3:135082459-135109751 (-)
BALB/cJ MGP_BALBcJ_G0006281
 lincRNA gene Chr3:131482283-131506207 (-)
C3H/HeJ MGP_C3HHeJ_G0006233
 lincRNA gene Chr3:135449433-135474194 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006446
 lincRNA gene Chr3:141195012-141216925 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005741
 lincRNA gene Chr3:127041119-127058777 (-)
CAST/EiJ MGP_CASTEiJ_G0006166
 lincRNA gene Chr3:135226473-135246869 (-)
CBA/J MGP_CBAJ_G0006216
 lincRNA gene Chr3:146031593-146053346 (-)
DBA/2J MGP_DBA2J_G0006238
 lincRNA gene Chr3:130795082-130814582 (-)
FVB/NJ MGP_FVBNJ_G0006259
 lincRNA gene Chr3:128386194-128407907 (-)
LP/J MGP_LPJ_G0006319
 lincRNA gene Chr3:137926308-137943439 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006249
 lincRNA gene Chr3:153993212-154017278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006452
 lincRNA gene Chr3:134709723-134727293 (-)
PWK/PhJ MGP_PWKPhJ_G0006103
 lincRNA gene Chr3:130565883-130588109 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006017
 lincRNA gene Chr3:132804053-132825908 (-)
WSB/EiJ MGP_WSBEiJ_G0006213
 lincRNA gene Chr3:135490248-135510889 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105952 Ensembl Gene Model | MGI Sequence Detail 17584 C57BL/6J ±  kb
transcript ENSMUST00000197904 Ensembl | MGI Sequence Detail 637 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:5662700
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory