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Gm39090 Gene Detail
Summary
  • Symbol
    Gm39090
  • Name
    predicted gene, 39090
  • Synonyms
    Gm44514
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5621975
    NCBI Gene: 105243058
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:127291107-127299965 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
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  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621975
lncRNA gene Chr7:127290758-127302227 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007277
lincRNA gene Chr7:132057427-132070821 (+)
A/J MGP_AJ_G0007274
lincRNA gene Chr7:128536954-128546134 (+)
AKR/J MGP_AKRJ_G0007244
lincRNA gene Chr7:131858661-131867263 (+)
BALB/cJ MGP_BALBcJ_G0007252
lincRNA gene Chr7:128188125-128196625 (+)
C3H/HeJ MGP_C3HHeJ_G0007196
lincRNA gene Chr7:131758173-131767400 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007422
lincRNA gene Chr7:137204387-137216490 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006627
lincRNA gene Chr7:129734077-129742720 (+)
CAST/EiJ MGP_CASTEiJ_G0007098
lincRNA gene Chr7:123552682-123562994 (+)
CBA/J MGP_CBAJ_G0007179
lincRNA gene Chr7:141850815-141861986 (+)
DBA/2J MGP_DBA2J_G0007200
lincRNA gene Chr7:126514773-126523782 (+)
FVB/NJ MGP_FVBNJ_G0007222
lincRNA gene Chr7:126366939-126375359 (+)
LP/J MGP_LPJ_G0007282
lincRNA gene Chr7:133537254-133546863 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007199
lincRNA gene Chr7:142942429-142952488 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007425
lincRNA gene Chr7:130844330-130854427 (+)
PWK/PhJ MGP_PWKPhJ_G0007040
lincRNA gene Chr7:119526982-119536802 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006948
lincRNA gene Chr7:117649134-117660099 (+)
WSB/EiJ MGP_WSBEiJ_G0007159
lincRNA gene Chr7:131806078-131820891 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108801 Ensembl Gene Model | MGI Sequence Detail 8859 C57BL/6J ±  kb
transcript ENSMUST00000205284 Ensembl | MGI Sequence Detail 972 Not Applicable  
For the selected sequence
Other
Accession IDs
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MGI:5753090
References
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  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/03/2022
MGI 6.21
The Jackson Laboratory