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Gm38666 Gene Detail
Summary
  • Symbol
    Gm38666
  • Name
    predicted gene, 38666
  • Feature Type
    protein coding gene
  • IDs
    MGI:5621551
    NCBI Gene: 103611158
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:37102969-37966349 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6857 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621551
 protein coding gene Chr18:37100684-37974926 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024301
 protein coding gene Chr18:35382737-36251401 (+)
A/J MGP_AJ_G0024267
 protein coding gene Chr18:34146491-35003194 (+)
AKR/J MGP_AKRJ_G0024235
 protein coding gene Chr18:35116511-35963994 (+)
BALB/cJ MGP_BALBcJ_G0024267
 protein coding gene Chr18:34193979-35068811 (+)
C3H/HeJ MGP_C3HHeJ_G0024034
 protein coding gene Chr18:35165010-36030210 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024708
 protein coding gene Chr18:36636504-37549446 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022148
 protein coding gene Chr18:34241051-35019697 (+)
CAST/EiJ MGP_CASTEiJ_G0023509
 protein coding gene Chr18:35165607-35969236 (+)
CBA/J MGP_CBAJ_G0024002
 protein coding gene Chr18:37715684-38659344 (+)
DBA/2J MGP_DBA2J_G0024134
 protein coding gene Chr18:33761920-34602736 (+)
FVB/NJ MGP_FVBNJ_G0024100
 protein coding gene Chr18:33474197-34313019 (+)
LP/J MGP_LPJ_G0024216
 protein coding gene Chr18:35425131-36313055 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024129
 protein coding gene Chr18:38962040-39920811 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024757
 protein coding gene Chr18:34971460-35828624 (+)
PWK/PhJ MGP_PWKPhJ_G0023253
 protein coding gene Chr18:34003995-34810305 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023053
 protein coding gene Chr18:35142275-36045708 (+)
WSB/EiJ MGP_WSBEiJ_G0023572
 protein coding gene Chr18:34880998-35729278 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102836 Ensembl Gene Model | MGI Sequence Detail 863381 C57BL/6J ±  kb
transcript ENSMUST00000194544 Ensembl | MGI Sequence Detail 313 Not Applicable  
polypeptide ENSMUSP00000141847 Ensembl | MGI Sequence Detail 104 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031904 Cadherin, C-terminal catenin-binding domain
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:78249 Wang X, et al., Molecular mechanisms governing Pcdh-gamma gene expression: evidence for a multiple promoter and cis-alternative splicing model. Genes Dev. 2002 Aug 1;16(15):1890-905
  • Latest
    J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory