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Gm38562 Gene Detail
Summary
  • Symbol
    Gm38562
  • Name
    predicted gene, 38562
  • Synonyms
    Gm43477
Location &
Maps
more
  • Sequence Map
    Chr5:71837611-71857167 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    54 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621447
 lncRNA gene Chr5:71837611-71859051 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004097
 antisense lncRNA gene Chr5:71567142-71587376 (-)
A/J MGP_AJ_G0004078
 antisense lncRNA gene Chr5:68886993-68907095 (-)
AKR/J MGP_AKRJ_G0004056
 antisense lncRNA gene Chr5:71089311-71109906 (-)
BALB/cJ MGP_BALBcJ_G0004064
 antisense lncRNA gene Chr5:69569953-69589053 (-)
C3H/HeJ MGP_C3HHeJ_G0004010
 antisense lncRNA gene Chr5:71468689-71491050 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004212
 antisense lncRNA gene Chr5:74565708-74584531 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003689
 antisense lncRNA gene Chr5:64644825-64664355 (-)
CAST/EiJ MGP_CASTEiJ_G0003973
 antisense lncRNA gene Chr5:70588776-70609779 (-)
CBA/J MGP_CBAJ_G0004004
 antisense lncRNA gene Chr5:76936021-76963827 (-)
DBA/2J MGP_DBA2J_G0004019
 antisense lncRNA gene Chr5:68960439-68978674 (-)
FVB/NJ MGP_FVBNJ_G0004038
 antisense lncRNA gene Chr5:68134660-68153562 (-)
LP/J MGP_LPJ_G0004099
 antisense lncRNA gene Chr5:72043630-72064205 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004027
 antisense lncRNA gene Chr5:80303927-80329178 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004208
 antisense lncRNA gene Chr5:70689983-70713296 (-)
PWK/PhJ MGP_PWKPhJ_G0003926
 antisense lncRNA gene Chr5:67925255-67944863 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003871
 antisense lncRNA gene Chr5:70050746-70070356 (-)
WSB/EiJ MGP_WSBEiJ_G0004008
 antisense lncRNA gene Chr5:70934493-70955266 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105489 Ensembl Gene Model | MGI Sequence Detail 19557 C57BL/6J ±  kb
transcript ENSMUST00000199398 Ensembl | MGI Sequence Detail 1126 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5663614
References
more
  • Summaries
    All 10
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory