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Gm38413 Gene Detail
Summary
  • Symbol
    Gm38413
  • Name
    predicted gene, 38413
  • Synonyms
    Gm43248
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5621298
    NCBI Gene: 330133
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:99878713-99901832 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    106 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621298
 lncRNA gene Chr5:99878713-99901832 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006713
 lincRNA gene Chr5:101149352-101173616 (-)
A/J MGP_AJ_G0006707
 lincRNA gene Chr5:97405564-97428678 (-)
AKR/J MGP_AKRJ_G0006677
 lincRNA gene Chr5:100619101-100642214 (-)
BALB/cJ MGP_BALBcJ_G0006682
 lincRNA gene Chr5:98425366-98448588 (-)
C3H/HeJ MGP_C3HHeJ_G0006628
 lincRNA gene Chr5:100945809-100968908 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006847
 lincRNA gene Chr5:105393272-105417801 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006104
 lincRNA gene Chr5:92690572-92713817 (-)
CAST/EiJ MGP_CASTEiJ_G0006551
 lincRNA gene Chr5:99608324-99634802 (-)
CBA/J MGP_CBAJ_G0006609
 lincRNA gene Chr5:109004759-109027860 (-)
DBA/2J MGP_DBA2J_G0006630
 lincRNA gene Chr5:97594082-97617676 (-)
FVB/NJ MGP_FVBNJ_G0006654
 lincRNA gene Chr5:96410791-96433890 (-)
LP/J MGP_LPJ_G0006714
 lincRNA gene Chr5:101770228-101796050 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006638
 lincRNA gene Chr5:114121886-114147138 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006849
 lincRNA gene Chr5:100088257-100113413 (-)
PWK/PhJ MGP_PWKPhJ_G0006490
 lincRNA gene Chr5:96041186-96065570 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006396
 lincRNA gene Chr5:97792089-97814848 (-)
WSB/EiJ MGP_WSBEiJ_G0006602
 lincRNA gene Chr5:100413787-100438486 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Gm38413
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 330133 NCBI Gene Model | MGI Sequence Detail 23120 C57BL/6J ±  kb
transcript NR_131054 RefSeq | MGI Sequence Detail 2348 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5663385
References
more
  • Summaries
    All 12
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory