Gm38163 Gene Detail

Summary

• Symbol
  Gm38163
• Name
  predicted gene, 38163

• Feature Type
  lncRNA gene
• IDs
  MGI:5611391
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:108461955-108462560 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611391	lncRNA gene	Chr9:108461955-108462560 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037097	sense intronic lncRNA gene	Chr9:110552123-110552764 (-)
A/J	MGP_AJ_G0037084	sense intronic lncRNA gene	Chr9:106500891-106501372 (-)
AKR/J	MGP_AKRJ_G0037032	sense intronic lncRNA gene	Chr9:109170083-109170564 (-)
BALB/cJ	MGP_BALBcJ_G0037075	sense intronic lncRNA gene	Chr9:106196233-106196714 (-)
C3H/HeJ	MGP_C3HHeJ_G0036762	sense intronic lncRNA gene	Chr9:109572796-109573277 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037589	sense intronic lncRNA gene	Chr9:113566771-113567284 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034631	sense intronic lncRNA gene	Chr9:103929047-103929736 (-)
CAST/EiJ	MGP_CASTEiJ_G0035949	sense intronic lncRNA gene	Chr9:109529385-109529918 (-)
CBA/J	MGP_CBAJ_G0036737	sense intronic lncRNA gene	Chr9:117573965-117574540 (-)
DBA/2J	MGP_DBA2J_G0036912	sense intronic lncRNA gene	Chr9:105959729-105960210 (-)
FVB/NJ	MGP_FVBNJ_G0036862	sense intronic lncRNA gene	Chr9:104721814-104722295 (-)
LP/J	MGP_LPJ_G0036960	sense intronic lncRNA gene	Chr9:110748221-110748728 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036870	sense intronic lncRNA gene	Chr9:119145761-119146242 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037706	sense intronic lncRNA gene	Chr9:109449227-109449708 (-)
PWK/PhJ	MGP_PWKPhJ_G0035643	sense intronic lncRNA gene	Chr9:106286123-106286676 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035451	sense intronic lncRNA gene	Chr9:109511569-109512062 (-)
WSB/EiJ	MGP_WSBEiJ_G0036151	sense intronic lncRNA gene	Chr9:109330409-109330890 (-)

Homology

• Gene Tree
  Gm38163
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102770 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102770	Ensembl Gene Model | MGI Sequence Detail	606	C57BL/6J
transcript	ENSMUST00000194112	Ensembl | MGI Sequence Detail	482	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;