Gm36983 Pseudogene Detail

Summary

• Symbol
  Gm36983
• Name
  predicted gene, 36983

• Feature Type
  pseudogene
• IDs
  MGI:5610211
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:23126583-23129085 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  40 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610211	pseudogene	Chr3:23126583-23129085 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040290	pseudogene	Chr3:20287649-20290151 (+)
A/J	MGP_AJ_G0040269	pseudogene	Chr3:20206211-20208713 (+)
AKR/J	MGP_AKRJ_G0040206	pseudogene	Chr3:20442224-20444730 (+)
BALB/cJ	MGP_BALBcJ_G0040271	pseudogene	Chr3:19901586-19904088 (+)
C3H/HeJ	MGP_C3HHeJ_G0039906	pseudogene	Chr3:20413413-20415915 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040862	pseudogene	Chr3:21429010-21431512 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038986	pseudogene	Chr3:20207497-20209889 (+)
CBA/J	MGP_CBAJ_G0039872	pseudogene	Chr3:22031108-22033610 (+)
DBA/2J	MGP_DBA2J_G0040070	pseudogene	Chr3:19779607-19782117 (+)
FVB/NJ	MGP_FVBNJ_G0040026	pseudogene	Chr3:19344651-19347153 (+)
LP/J	MGP_LPJ_G0040118	pseudogene	Chr3:20934351-20936853 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040022	pseudogene	Chr3:24172259-24174773 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040961	pseudogene	Chr3:20122753-20125255 (+)
PWK/PhJ	MGP_PWKPhJ_G0038682	pseudogene	Chr3:19339790-19342313 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038378	pseudogene	Chr3:19758496-19761073 (+)
WSB/EiJ	MGP_WSBEiJ_G0039213	pseudogene	Chr3:20131708-20134219 (+)

Homology

• Gene Tree
  Gm36983
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm36983
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103275 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103275	Ensembl Gene Model | MGI Sequence Detail	2503	C57BL/6J
transcript	ENSMUST00000192280	Ensembl | MGI Sequence Detail	1102	Not Applicable

References

• Summaries
  All 3

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426