Gm35822 Gene Detail

Summary

• Symbol
  Gm35822
• Name
  predicted gene, 35822
• Synonyms
  Gm44004

• Feature Type
  lncRNA gene
• IDs
  MGI:5594981
  NCBI Gene: 102639529
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:10895489-10970125 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  379 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594981	lncRNA gene	Chr6:10895489-10970125 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006900	lincRNA gene	Chr6:7866247-7943829 (+)
A/J	MGP_AJ_G0006894	lincRNA gene	Chr6:7580611-7645280 (+)
AKR/J	MGP_AKRJ_G0006864	lincRNA gene	Chr6:7849194-7921493 (+)
BALB/cJ	MGP_BALBcJ_G0006870	lincRNA gene	Chr6:7610653-7685274 (+)
C3H/HeJ	MGP_C3HHeJ_G0006815	lincRNA gene	Chr6:7795858-7872068 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007035	lincRNA gene	Chr6:8239101-8309172 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006283	lincRNA gene	Chr6:7138440-7200150 (+)
CAST/EiJ	MGP_CASTEiJ_G0006733	lincRNA gene	Chr6:7723799-7787995 (+)
CBA/J	MGP_CBAJ_G0006797	lincRNA gene	Chr6:8345652-8427170 (+)
DBA/2J	MGP_DBA2J_G0006817	lincRNA gene	Chr6:7525319-7588261 (+)
FVB/NJ	MGP_FVBNJ_G0006840	lincRNA gene	Chr6:7457330-7533833 (+)
LP/J	MGP_LPJ_G0006900	lincRNA gene	Chr6:7882852-7953951 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006822	lincRNA gene	Chr6:8733310-8833010 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007037	lincRNA gene	Chr6:7755203-7829443 (+)
PWK/PhJ	MGP_PWKPhJ_G0006675	lincRNA gene	Chr6:7392440-7462240 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006583	lincRNA gene	Chr6:7772047-7835207 (+)
WSB/EiJ	MGP_WSBEiJ_G0006788	lincRNA gene	Chr6:7730403-7794396 (+)

Homology

• Gene Tree
  Gm35822
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107847 (Evidence)
• NCBI Gene
  102639529

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107847	Ensembl Gene Model | MGI Sequence Detail	74637	C57BL/6J
transcript	ENSMUST00000204954	Ensembl | MGI Sequence Detail	562	Not Applicable

Other
Accession IDs

MGI:5690396

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;