Gm35715 Gene Detail

Summary

• Symbol
  Gm35715
• Name
  predicted gene, 35715
• Synonyms
  Gm42762

• Feature Type
  lncRNA gene
• IDs
  MGI:5594874
  NCBI Gene: 102639389
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:110498397-110504022 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594874	lncRNA gene	Chr9:110497393-110504261 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004700	antisense lncRNA gene	Chr9:112835876-112841441 (-)
A/J	MGP_AJ_G0004680	antisense lncRNA gene	Chr9:108729692-108735137 (-)
AKR/J	MGP_AKRJ_G0004663	antisense lncRNA gene	Chr9:111431152-111436597 (-)
BALB/cJ	MGP_BALBcJ_G0004664	antisense lncRNA gene	Chr9:108479139-108484578 (-)
C3H/HeJ	MGP_C3HHeJ_G0004613	antisense lncRNA gene	Chr9:111938409-111943854 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004814	antisense lncRNA gene	Chr9:115899373-115907238 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004255	antisense lncRNA gene	Chr9:105949866-105955312 (-)
CAST/EiJ	MGP_CASTEiJ_G0004569	antisense lncRNA gene	Chr9:111733654-111739516 (-)
CBA/J	MGP_CBAJ_G0004607	antisense lncRNA gene	Chr9:120211086-120219462 (-)
DBA/2J	MGP_DBA2J_G0004622	antisense lncRNA gene	Chr9:108193356-108198801 (-)
FVB/NJ	MGP_FVBNJ_G0004640	antisense lncRNA gene	Chr9:107021180-107026807 (-)
LP/J	MGP_LPJ_G0004704	antisense lncRNA gene	Chr9:113130203-113135587 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004626	antisense lncRNA gene	Chr9:121557105-121562550 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004813	antisense lncRNA gene	Chr9:111768579-111773937 (-)
PWK/PhJ	MGP_PWKPhJ_G0004521	antisense lncRNA gene	Chr9:108437744-108443181 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004458	antisense lncRNA gene	Chr9:111851016-111856313 (-)
WSB/EiJ	MGP_WSBEiJ_G0004612	antisense lncRNA gene	Chr9:111635964-111641528 (-)

Homology

• Gene Tree
  Gm35715
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000104945 (Evidence)
• NCBI Gene
  102639389

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104945	Ensembl Gene Model | MGI Sequence Detail	5626	C57BL/6J
transcript	ENSMUST00000197421	Ensembl | MGI Sequence Detail	2054	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:5662899

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;