Gm35545 Gene Detail

Summary

• Symbol
  Gm35545
• Name
  predicted gene, 35545

• Feature Type
  lncRNA gene
• IDs
  MGI:5594704
  NCBI Gene: 102639174
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr16:19037318-19060084 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  744 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594704	lncRNA gene	Chr16:19037318-19060084 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  3

• NCBI Gene
  102639174

Representative Sequences			Length	Strain/Species
genomic	102639174	NCBI Gene Model | MGI Sequence Detail	22767	C57BL/6J
transcript	XR_384721	RefSeq | MGI Sequence Detail	1464	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm35545:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr137399	Chr16:19037322-19037353 (+)	20 bp
Tssr137400	Chr16:19037363-19037370 (+)	49 bp
Tssr137402	Chr16:19055092-19055102 (+)	17,779 bp
Tssr137403	Chr16:19055141-19055153 (+)	17,829 bp