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Gm35040 Gene Detail
Summary
  • Symbol
    Gm35040
  • Name
    predicted gene, 35040
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5594199
    NCBI Gene: 102638488
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:79185760-79209781 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    114 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5594199
lncRNA gene Chr7:79185760-79209781 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007223
lincRNA gene Chr7:81423846-81451656 (+)
A/J MGP_AJ_G0007220
lincRNA gene Chr7:79546309-79571494 (+)
AKR/J MGP_AKRJ_G0007190
lincRNA gene Chr7:81249900-81273680 (+)
BALB/cJ MGP_BALBcJ_G0007198
lincRNA gene Chr7:79240882-79265396 (+)
C3H/HeJ MGP_C3HHeJ_G0007142
lincRNA gene Chr7:81912046-81939257 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007368
lincRNA gene Chr7:84624324-84649956 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006576
lincRNA gene Chr7:82086462-82111443 (+)
CAST/EiJ MGP_CASTEiJ_G0007044
lincRNA gene Chr7:72784087-72809232 (+)
CBA/J MGP_CBAJ_G0007125
lincRNA gene Chr7:87457261-87484171 (+)
DBA/2J MGP_DBA2J_G0007146
lincRNA gene Chr7:78119852-78143817 (+)
FVB/NJ MGP_FVBNJ_G0007169
lincRNA gene Chr7:78032569-78056633 (+)
LP/J MGP_LPJ_G0007228
lincRNA gene Chr7:82673972-82703361 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007145
lincRNA gene Chr7:87641720-87665683 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007371
lincRNA gene Chr7:80702075-80726987 (+)
PWK/PhJ MGP_PWKPhJ_G0006987
lincRNA gene Chr7:71287204-71312220 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006895
lincRNA gene Chr7:67690668-67716963 (+)
WSB/EiJ MGP_WSBEiJ_G0007105
lincRNA gene Chr7:81029052-81054931 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm35040
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108616 Ensembl Gene Model | MGI Sequence Detail 24022 C57BL/6J ±  kb
transcript ENSMUST00000206829 Ensembl | MGI Sequence Detail 5125 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 12
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory