Gm35037 Gene Detail

Summary

• Symbol
  Gm35037
• Name
  predicted gene, 35037
• Synonyms
  Gm44160

• Feature Type
  lncRNA gene
• IDs
  MGI:5594196
  NCBI Gene: 102638484
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:3500762-3524349 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594196	lncRNA gene	Chr7:3499873-3524349 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007113	lincRNA gene	Chr7:371981-395294 (+)
A/J	MGP_AJ_G0007110	lincRNA gene	Chr7:360774-384442 (+)
AKR/J	MGP_AKRJ_G0007078	lincRNA gene	Chr7:356739-381780 (+)
BALB/cJ	MGP_BALBcJ_G0007085	lincRNA gene	Chr7:362003-387088 (+)
C3H/HeJ	MGP_C3HHeJ_G0007030	lincRNA gene	Chr7:370067-397027 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007251	lincRNA gene	Chr7:377355-406559 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006476	lincRNA gene	Chr7:257264-281858 (+)
CAST/EiJ	MGP_CASTEiJ_G0006936	lincRNA gene	Chr7:369317-396745 (+)
CBA/J	MGP_CBAJ_G0007011	lincRNA gene	Chr7:482132-514628 (+)
DBA/2J	MGP_DBA2J_G0007033	lincRNA gene	Chr7:352388-382121 (+)
FVB/NJ	MGP_FVBNJ_G0007056	lincRNA gene	Chr7:350490-375313 (+)
LP/J	MGP_LPJ_G0007116	lincRNA gene	Chr7:378802-403556 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007036	lincRNA gene	Chr7:404420-430280 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007257	lincRNA gene	Chr7:354162-382464 (+)
PWK/PhJ	MGP_PWKPhJ_G0006880	lincRNA gene	Chr7:497107-523601 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006790	lincRNA gene	Chr7:428215-453703 (+)
WSB/EiJ	MGP_WSBEiJ_G0006997	lincRNA gene	Chr7:361505-388546 (+)

Homology

• Gene Tree
  Gm35037
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000107985 (Evidence)
• NCBI Gene
  102638484

Representative Sequences			Length	Strain/Species
genomic	102638484	NCBI Gene Model | MGI Sequence Detail	23588	C57BL/6J
transcript	XR_391115	RefSeq | MGI Sequence Detail	1639	C57BL/6J

Other
Accession IDs

MGI:5690552

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm35037:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64274	Chr7:3504050-3504054 (+)	3,290 bp