Gm34768 Pseudogene Detail

Summary

• Symbol
  Gm34768
• Name
  predicted gene, 34768

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5593927
  NCBI Gene: 102638132
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:11904893-11915121 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  43 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593927	pseudogene	Chr2:11904893-11921713 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040210	pseudogene	Chr2:9341496-9351718 (+)
A/J	MGP_AJ_G0040197	pseudogene	Chr2:8968880-8978561 (+)
AKR/J	MGP_AKRJ_G0040131	pseudogene	Chr2:9266091-9275809 (+)
BALB/cJ	MGP_BALBcJ_G0040195	pseudogene	Chr2:8949996-8965633 (+)
C3H/HeJ	MGP_C3HHeJ_G0039834	pseudogene	Chr2:9178259-9188375 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040784	pseudogene	Chr2:9578845-9588556 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038923	pseudogene	Chr2:9158221-9167956 (+)
CBA/J	MGP_CBAJ_G0039802	pseudogene	Chr2:10004772-10015467 (+)
DBA/2J	MGP_DBA2J_G0039996	pseudogene	Chr2:8858825-8869579 (+)
FVB/NJ	MGP_FVBNJ_G0039955	pseudogene	Chr2:8784584-8794652 (+)
LP/J	MGP_LPJ_G0040040	pseudogene	Chr2:9250952-9262437 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039951	pseudogene	Chr2:9889360-9902511 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040881	pseudogene	Chr2:9161951-9171656 (+)
PWK/PhJ	MGP_PWKPhJ_G0038612	pseudogene	Chr2:8810562-8821416 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038311	pseudogene	Chr2:9154433-9164940 (+)
WSB/EiJ	MGP_WSBEiJ_G0039141	pseudogene	Chr2:9269767-9281185 (+)

Homology

• Gene Tree
  Gm34768
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000103542 (Evidence)
• NCBI Gene
  102638132

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103542	Ensembl Gene Model | MGI Sequence Detail	10229	C57BL/6J
transcript	ENSMUST00000193884	Ensembl | MGI Sequence Detail	565	Not Applicable
polypeptide	XP_006497644	RefSeq | MGI Sequence Detail	306	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;