Gm34296 Gene Detail

Summary

• Symbol
  Gm34296
• Name
  predicted gene, 34296

• Feature Type
  protein coding gene
• IDs
  MGI:5593455
  NCBI Gene: 102637505
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr4:133519348-133542456 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593455	protein coding gene	Chr4:133519348-133542456 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  148
• Chemically induced (other)
  2
• Gene trapped
  144
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Gm34296
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102637505

Representative Sequences			Length	Strain/Species
genomic	102637505	NCBI Gene Model | MGI Sequence Detail	23109	C57BL/6J
transcript	XM_030253992	RefSeq | MGI Sequence Detail	1119	C57BL/6J
polypeptide	XP_030109852	RefSeq | MGI Sequence Detail	367	C57BL/6J

References

• Summaries
  All 14

  Phenotypes 12
• Earliest
  J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm34296:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr43820	Chr4:133543116-133543127 (-)	-666 bp
Tssr43819	Chr4:133541417-133541445 (-)	1,025 bp
Tssr43818	Chr4:133540605-133540616 (-)	1,845 bp