Gm33799 Gene Detail

Summary

• Symbol
  Gm33799
• Name
  predicted gene, 33799

• Feature Type
  lncRNA gene
• IDs
  MGI:5592958
  NCBI Gene: 102636840
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:8475869-8491368 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592958	lncRNA gene	Chr17:8474829-8491368 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm33799
  

Human Diseases

• References
  6 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  332 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm33799
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  3

• Ensembl
  ENSMUSG00000120679 (Evidence)
• NCBI Gene
  102636840

Representative Sequences			Length	Strain/Species
genomic	102636840	NCBI Gene Model | MGI Sequence Detail	15500	C57BL/6J
transcript	XR_385198	RefSeq | MGI Sequence Detail	1554	C57BL/6J

References

• Summaries
  All 335

  Diseases 6

  Phenotypes 332
• Earliest
  J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
• Latest
  J:346702 Colombi I, et al., Heterogeneous subpopulations of GABA(A)R-responding neurons coexist across neuronal network scales and developmental stages in health and disease. iScience. 2024 Apr 19;27(4):109438

TSS for Gm33799:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr146356	Chr17:8491358-8491361 (-)	8 bp