Gm32005 Gene Detail

Summary

• Symbol
  Gm32005
• Name
  predicted gene, 32005
• Synonyms
  Gm45905

• Feature Type
  lncRNA gene
• IDs
  MGI:5591164
  NCBI Gene: 102634420
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:97035790-97098959 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1739 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591164	lncRNA gene	Chr8:97035746-97098959 (+)
129S1/SvImJ	ENSMUSG00200015298	lncRNA gene	Chr8:91399201-91451277 (+)
A/J	ENSMUSG00195004160	lncRNA gene	Chr8:91728345-91780365 (+)
AKR/J	ENSMUSG00220011809	lncRNA gene	Chr8:91761642-91813665 (+)
BALB/cJ	ENSMUSG00180004186	lncRNA gene	Chr8:91629837-91681925 (+)
C3H/HeJ	ENSMUSG00175002795	lncRNA gene	Chr8:91680055-91732104 (+)
C57BL/6NJ	ENSMUSG00215001307	lncRNA gene	Chr8:91308566-91360586 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017461	lncRNA gene	Chr8:91108765-91161164 (+)
CBA/J	ENSMUSG00210015324	lncRNA gene	Chr8:91612087-91664135 (+)
DBA/2J	ENSMUSG00185024123	lncRNA gene	Chr8:97720998-97773043 (+)
FVB/NJ	ENSMUSG00205019867	lncRNA gene	Chr8:90715506-90767576 (+)
JF1/MsJ	ENSUMUG00000047636	lncRNA gene	Chr8:100081553-100133641 (+)
LP/J	ENSMUSG00230008366	lncRNA gene	Chr8:101383380-101435397 (+)
NOD/ShiLtJ	ENSMUSG00190013084	lncRNA gene	Chr8:91734422-91786379 (+)
NZO/HlLtJ	ENSMUSG00225011615	lncRNA gene	Chr8:104780199-104832275 (+)
PWK/PhJ	ENSLUMG00010042933	lncRNA gene	Chr8:91461667-91514570 (+)
SPRET/EiJ	ENSMSPG00010006515	lncRNA gene	Chr8:93538349-93591594 (+)
WSB/EiJ	ENSIUOG00005006271	lncRNA gene	Chr8:92448580-92500544 (+)

Homology

• Gene Tree
  Gm32005
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  6

• Ensembl
  ENSMUSG00000110623 (Evidence)
• NCBI Gene
  102634420

Representative Sequences			Length	Strain/Species
genomic	102634420	NCBI Gene Model | MGI Sequence Detail	63170	C57BL/6J
transcript	XR_879124	RefSeq | MGI Sequence Detail	5089	C57BL/6J

Other
Accession IDs

MGI:5805020

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;