Gm31326 Gene Detail

Summary

• Symbol
  Gm31326
• Name
  predicted gene, 31326
• Synonyms
  Gm37683

• Feature Type
  lncRNA gene
• IDs
  MGI:5590485
  NCBI Gene: 102633518
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:101866459-101867506 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590485	lncRNA gene	Chr9:101861592-101874748 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002368	unclassified gene	Chr9:103525847-103526894 (+)
A/J	MGP_AJ_G0002346	unclassified gene	Chr9:99815727-99816774 (+)
AKR/J	MGP_AKRJ_G0002331	unclassified gene	Chr9:102281604-102282651 (+)
BALB/cJ	MGP_BALBcJ_G0002341	unclassified gene	Chr9:99528634-99529681 (+)
C3H/HeJ	MGP_C3HHeJ_G0002318	unclassified gene	Chr9:102698930-102699977 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002467	unclassified gene	Chr9:106436441-106437488 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002067	unclassified gene	Chr9:97423638-97424690 (+)
CAST/EiJ	MGP_CASTEiJ_G0002279	unclassified gene	Chr9:102499488-102500535 (+)
CBA/J	MGP_CBAJ_G0002312	unclassified gene	Chr9:110151728-110152775 (+)
DBA/2J	MGP_DBA2J_G0002315	unclassified gene	Chr9:99317459-99318506 (+)
FVB/NJ	MGP_FVBNJ_G0002323	unclassified gene	Chr9:98116531-98117577 (+)
LP/J	MGP_LPJ_G0002369	unclassified gene	Chr9:103732838-103733885 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002298	unclassified gene	Chr9:112005049-112006096 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002455	unclassified gene	Chr9:102530066-102531113 (+)
PWK/PhJ	MGP_PWKPhJ_G0002240	unclassified gene	Chr9:99552772-99553824 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002199	unclassified gene	Chr9:102572112-102573163 (+)
WSB/EiJ	MGP_WSBEiJ_G0002309	unclassified gene	Chr9:102409643-102410690 (+)

Homology

• Gene Tree
  Gm31326
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31326
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103026 (Evidence)
• NCBI Gene
  102633518

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103026	Ensembl Gene Model | MGI Sequence Detail	1048	C57BL/6J
transcript	AK076854	GenBank | ENA | DDBJ | MGI Sequence Detail	1051	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5610911

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm31326:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86718	Chr9:101866392-101866400 (+)	-63 bp