Gm31305 Gene Detail

Summary

• Symbol
  Gm31305
• Name
  predicted gene, 31305
• Synonyms
  Gm43076

• Feature Type
  lncRNA gene
• IDs
  MGI:5590464
  NCBI Gene: 102633492
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:97637655-97643482 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590464	lncRNA gene	Chr3:97637655-97647154 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003799	antisense lncRNA gene	Chr3:98688722-98694559 (+)
A/J	MGP_AJ_G0003779	antisense lncRNA gene	Chr3:95530016-95535813 (+)
AKR/J	MGP_AKRJ_G0003755	antisense lncRNA gene	Chr3:97815449-97821256 (+)
BALB/cJ	MGP_BALBcJ_G0003766	antisense lncRNA gene	Chr3:95333621-95339456 (+)
C3H/HeJ	MGP_C3HHeJ_G0003713	antisense lncRNA gene	Chr3:98085334-98091127 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003908	antisense lncRNA gene	Chr3:102362476-102368247 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003411	antisense lncRNA gene	Chr3:91796604-91802325 (+)
CAST/EiJ	MGP_CASTEiJ_G0003677	antisense lncRNA gene	Chr3:97381271-97387063 (+)
CBA/J	MGP_CBAJ_G0003708	antisense lncRNA gene	Chr3:106003692-106009509 (+)
DBA/2J	MGP_DBA2J_G0003719	antisense lncRNA gene	Chr3:94844781-94850598 (+)
FVB/NJ	MGP_FVBNJ_G0003740	antisense lncRNA gene	Chr3:92835253-92841057 (+)
LP/J	MGP_LPJ_G0003801	antisense lncRNA gene	Chr3:99950161-99955988 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003728	antisense lncRNA gene	Chr3:112093125-112098928 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003909	antisense lncRNA gene	Chr3:97441231-97447041 (+)
PWK/PhJ	MGP_PWKPhJ_G0003633	antisense lncRNA gene	Chr3:94710797-94716633 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003577	antisense lncRNA gene	Chr3:95714629-95720232 (+)
WSB/EiJ	MGP_WSBEiJ_G0003713	antisense lncRNA gene	Chr3:97880240-97886044 (+)

Homology

• Gene Tree
  Gm31305
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31305
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  4

• Ensembl
  ENSMUSG00000105245 (Evidence)
• NCBI Gene
  102633492

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105245	Ensembl Gene Model | MGI Sequence Detail	5828	C57BL/6J
transcript	ENSMUST00000200435	Ensembl | MGI Sequence Detail	761	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5663213

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;