Muc12 Gene Detail

Summary

• Symbol
  Muc12
• Name
  mucin 12, cell surface associated
• Synonyms
  Gm31160

• Feature Type
  protein coding gene
• IDs
  MGI:5590319
  NCBI Gene: 102633301
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:137203645-137213788 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590319	protein coding gene	Chr5:137203645-137220180 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  MUC12, mucin 12, cell surface associated

• Vertebrate Orthologs
  2

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MUC12, mucin 12, cell surface associated
  
• Synonyms
  MUC11, MUC-11, MUC-12
• Links
  HGNC:7510

  NCBI Gene ID: 10071

  neXtProt AC: NX_Q9UKN1

  UniProt: Q9UKN1

  
  
• Chr Location
  7q22.1; chr7:100969565-101018939 (+)  GRCh38

---

• MGI Vertebrate Homology
  Muc12 stringent orthology
  1 human;1 mouse;1 zebrafish
  
• HCOP
  vertebrate homology predictions: MUC12
• Gene Tree
  Muc12
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  8
• UniProt
  1

• Ensembl
  ENSMUSG00000118522 (Evidence)
• NCBI Gene
  102633301

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118522	Ensembl Gene Model | MGI Sequence Detail	10144	C57BL/6J
transcript	ENSMUST00000239135	Ensembl | MGI Sequence Detail	1364	Not Applicable
polypeptide	ENSMUSP00000159075	Ensembl | MGI Sequence Detail	341	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR000742 EGF-like domain
  IPR000082 SEA domain

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;