Gm30835 Gene Detail

Summary

• Symbol
  Gm30835
• Name
  predicted gene, 30835
• Synonyms
  Gm42950

• Feature Type
  lncRNA gene
• IDs
  MGI:5589994
  NCBI Gene: 102632873
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:7995234-8010392 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589994	lncRNA gene	Chr5:7730108-8010392 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006576	lincRNA gene	Chr5:4654859-4918623 (-)
A/J	MGP_AJ_G0006567	lincRNA gene	Chr5:4483615-4752849 (-)
AKR/J	MGP_AKRJ_G0006540	lincRNA gene	Chr5:4606071-4879215 (-)
BALB/cJ	MGP_BALBcJ_G0006542	lincRNA gene	Chr5:4714226-4977424 (-)
C3H/HeJ	MGP_C3HHeJ_G0006491	lincRNA gene	Chr5:4795359-5082054 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006708	lincRNA gene	Chr5:5116992-5397578 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005981	lincRNA gene	Chr5:4369639-4601971 (-)
CAST/EiJ	MGP_CASTEiJ_G0006420	lincRNA gene	Chr5:4692413-4935579 (-)
CBA/J	MGP_CBAJ_G0006475	lincRNA gene	Chr5:5254113-5530143 (-)
DBA/2J	MGP_DBA2J_G0006495	lincRNA gene	Chr5:4620258-4893389 (-)
FVB/NJ	MGP_FVBNJ_G0006517	lincRNA gene	Chr5:4424594-4689087 (-)
LP/J	MGP_LPJ_G0006577	lincRNA gene	Chr5:4776474-5052340 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006504	lincRNA gene	Chr5:5193883-5507589 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006712	lincRNA gene	Chr5:4624201-4906734 (-)
PWK/PhJ	MGP_PWKPhJ_G0006358	lincRNA gene	Chr5:4449994-4700678 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006267	lincRNA gene	Chr5:4828164-5101176 (-)
WSB/EiJ	MGP_WSBEiJ_G0006469	lincRNA gene	Chr5:4642462-4895307 (-)

Homology

• Gene Tree
  Gm30835
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105068 (Evidence)
• NCBI Gene
  102632873

Representative Sequences			Length	Strain/Species
genomic	102632873	NCBI Gene Model | MGI Sequence Detail	15159	C57BL/6J
transcript	XR_376720	RefSeq | MGI Sequence Detail	275	C57BL/6J

Other
Accession IDs

MGI:5663087

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;