Gm29793 Pseudogene Detail

Summary

• Symbol
  Gm29793
• Name
  predicted gene, 29793

• Feature Type
  pseudogene
• IDs
  MGI:5588952
  NCBI Gene: 101056188
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:147346730-147347189 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  17 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588952	pseudogene	Chr5:147346459-147347638 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013323	pseudogene	Chr5:153076642-153077101 (+)
A/J	MGP_AJ_G0013305	pseudogene	Chr5:146580545-146581004 (+)
AKR/J	MGP_AKRJ_G0013268	pseudogene	Chr5:151084981-151085440 (+)
BALB/cJ	MGP_BALBcJ_G0013283	pseudogene	Chr5:147793749-147794208 (+)
C3H/HeJ	MGP_C3HHeJ_G0013131	pseudogene	Chr5:152054246-152054705 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013652	pseudogene	Chr5:158663298-158663757 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011785	pseudogene	Chr5:140993767-140994266 (+)
CAST/EiJ	MGP_CASTEiJ_G0012850	pseudogene	Chr5:151617911-151618370 (+)
CBA/J	MGP_CBAJ_G0013100	pseudogene	Chr5:165303143-165303602 (+)
DBA/2J	MGP_DBA2J_G0013185	pseudogene	Chr5:146262488-146262947 (+)
FVB/NJ	MGP_FVBNJ_G0013181	pseudogene	Chr5:145467577-145468036 (+)
LP/J	MGP_LPJ_G0013253	pseudogene	Chr5:153770003-153770462 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013200	pseudogene	Chr5:167563229-167563688 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013655	pseudogene	Chr5:150998002-150998461 (+)
PWK/PhJ	MGP_PWKPhJ_G0012664	pseudogene	Chr5:145360747-145361206 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012449	pseudogene	Chr5:148322545-148322995 (+)
WSB/EiJ	MGP_WSBEiJ_G0012891	pseudogene	Chr5:151803880-151804339 (+)

Homology

• Gene Tree
  Gm29793
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107037 (Evidence)
• NCBI Gene
  101056188

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107037	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000202874	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;