Gm29725 Pseudogene Detail

Summary

• Symbol
  Gm29725
• Name
  predicted gene, 29725

• Feature Type
  pseudogene
• IDs
  MGI:5588884
  NCBI Gene: 101055808
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:16381308-16381714 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588884	pseudogene	Chr7:16381308-16381714 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011582	pseudogene	Chr2:32186476-32186885 (-)
A/J	MGP_AJ_G0013821	pseudogene	Chr7:14120375-14120781 (-)
AKR/J	MGP_AKRJ_G0013769	pseudogene	Chr7:14446633-14447039 (-)
BALB/cJ	MGP_BALBcJ_G0013804	pseudogene	Chr7:14233107-14233513 (-)
C3H/HeJ	MGP_C3HHeJ_G0013626	pseudogene	Chr7:14635876-14636283 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010443	pseudogene	Chr11:61042142-61042555 (-)
CBA/J	MGP_CBAJ_G0013607	pseudogene	Chr7:15596786-15597193 (-)
DBA/2J	MGP_DBA2J_G0013684	pseudogene	Chr7:14011307-14011713 (-)
FVB/NJ	MGP_FVBNJ_G0013680	pseudogene	Chr7:13916297-13916704 (-)
LP/J	MGP_LPJ_G0010722	pseudogene	Chr11:61954415-61954816 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013699	pseudogene	Chr7:15540018-15540425 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0010338	pseudogene	Chr11:59288562-59288975 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010147	pseudogene	Chr11:60906932-60907348 (-)
WSB/EiJ	MGP_WSBEiJ_G0010499	pseudogene	Chr11:60698500-60698898 (-)

Homology

• Gene Tree
  Gm29725
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000108610 (Evidence)
• NCBI Gene
  101055808

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108610	Ensembl Gene Model | MGI Sequence Detail	407	C57BL/6J
transcript	ENSMUST00000206614	Ensembl | MGI Sequence Detail	407	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;